esm
面向蛋白质语言模型的综合工具包,包括ESM3(跨序列、结构和功能的生成式多模态蛋白质设计)和ESM C(高效的蛋白质嵌入与表示)。适用于处理蛋白质序列、结构或功能预测;设计新蛋白质;生成蛋白质嵌入;执行逆向折叠;或开展蛋白质工程任务。支持本地模型使用和基于云的Forge API以实现可扩展推理。
机器翻译查看英文原文
Comprehensive toolkit for protein language models including ESM3 (generative multimodal protein design across sequence, structure, and function) and ESM C (efficient protein embeddings and representations). Use this skill when working with protein sequences, structures, or function prediction; designing novel proteins; generating protein embeddings; performing inverse folding; or conducting protein engineering tasks. Supports both local model usage and cloud-based Forge API for scalable inference.
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原文涵盖的主题
- ESM: Evolutionary Scale Modeling
- Overview
- Core Capabilities
- 1. Protein Sequence Generation with ESM3
- 2. Structure Prediction and Inverse Folding
- 3. Protein Embeddings with ESM C
- 4. Function Conditioning and Annotation
- 5. Chain-of-Thought Generation
ESM provides state-of-the-art protein language models for understanding, generating, and designing proteins. This skill enables working with two model families: ESM3 for generative protein design across sequence, structure, and function, and ESM C for efficient protein representation learning and embeddings. Generate novel protein sequences with desired properties using multimodal generative modeling. When to use: Designing proteins with specific functional properties Completing partial protein sequences Generating variants of existing proteins Creating proteins with desired structural characteristics Basic usage: For remote/cloud usage via Forge API: See references/esm3-api.md for detailed ESM3 model specifications, advanced generation configurations, and multimodal prompting examples. Use ESM3's structure track for structure prediction from sequence or inverse folding (sequence design from structure). Structure prediction: Inverse folding (sequence from structure): Generate high-quality embeddings for downstream tasks like function prediction, classification, or similarity analysis. When to use: Extracting protein representations for machine learning Computing sequence similariti
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- 来源仓库
- davila7/claude-code-templates
- 源文件
- cli-tool/components/skills/scientific/esm/SKILL.md
- 固定版本
- 21be197f100a12b8d0dd9a211cc244c8179f84d3
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原作者:davila7/claude-code-templates · 原作者仓库元数据。文档核查:未核查。最近来源检查:2026-11-09T15:01:40.049Z。
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