gwas-database
Query NHGRI-EBI GWAS Catalog for SNP-trait associations. Search variants by rs ID, disease/trait, gene, retrieve p-values and summary statistics, for genetic epidemiology and polygenic risk scores.
Target: Databases. Automatically collected · unverified.
Excerpt from the author’s documentation
Extracted from a fixed version of SKILL.md in its original language. This is the author’s documentation; installation, compatibility and runtime results have not been verified by this site.
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Topics in the source
- GWAS Catalog Database
- Overview
- When to Use This Skill
- Core Capabilities
- 1. Understanding GWAS Catalog Data Structure
- 2. Web Interface Searches
- 3. REST API Access
- 4. Query Examples and Patterns
The GWAS Catalog is a comprehensive repository of published genome-wide association studies maintained by the National Human Genome Research Institute (NHGRI) and the European Bioinformatics Institute (EBI). The catalog contains curated SNP-trait associations from thousands of GWAS publications, including genetic variants, associated traits and diseases, p-values, effect sizes, and full summary statistics for many studies. This skill should be used when queries involve: Genetic variant associations: Finding SNPs associated with diseases or traits SNP lookups: Retrieving information about specific genetic variants (rs IDs) Trait/disease searches: Discovering genetic associations for phenotypes Gene associations: Finding variants in or near specific genes GWAS summary statistics: Accessing complete genome-wide association data Study metadata: Retrieving publication and cohort information Population genetics: Exploring ancestry-specific associations Polygenic risk scores: Identifying variants for risk prediction models Functional genomics: Understanding variant effects and genomic context Systematic reviews: Comprehensive literature synthesis of genetic associations The GWAS Catalog i
This is an excerpt. Refer to the complete source and its current requirements.
- Source repository
- davila7/claude-code-templates
- Source file
- cli-tool/components/skills/scientific/gwas-database/SKILL.md
- Fixed revision
- 21be197f100a12b8d0dd9a211cc244c8179f84d3
Sources and evidence
This record was collected automatically. Its documentation, suitability and runtime behavior have not been manually verified.
Author: davila7/claude-code-templates · original repository metadata. Documentation review: Not reviewed. Last source check: 2026-11-09T15:01:40.104Z.
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License and attribution
MIT. Third-party content and copyright remain with their authors. Refer to the original license and terms.
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