SKILL

pubmed-database

Direct REST API access to PubMed. Advanced Boolean/MeSH queries, E-utilities API, batch processing, citation management. For Python workflows, prefer biopython (Bio.Entrez). Use this for direct HTTP/REST work or custom API implementations.

Target: Databases. Automatically collected · unverified.

Excerpt from the author’s documentation

Extracted from a fixed version of SKILL.md in its original language. This is the author’s documentation; installation, compatibility and runtime results have not been verified by this site.

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Topics in the source

  • PubMed Database
  • Overview
  • When to Use This Skill
  • Core Capabilities
  • 1. Advanced Search Query Construction
  • 2. MeSH Terms and Controlled Vocabulary
  • 3. Article Type and Publication Filtering
  • 4. Programmatic Access via E-utilities API

PubMed is the U.S. National Library of Medicine's comprehensive database providing free access to MEDLINE and life sciences literature. Construct advanced queries with Boolean operators, MeSH terms, and field tags, access data programmatically via E-utilities API for systematic reviews and literature analysis. This skill should be used when: Searching for biomedical or life sciences research articles Constructing complex search queries with Boolean operators, field tags, or MeSH terms Conducting systematic literature reviews or meta-analyses Accessing PubMed data programmatically via the E-utilities API Finding articles by specific criteria (author, journal, publication date, article type) Retrieving citation information, abstracts, or full-text articles Working with PMIDs (PubMed IDs) or DOIs Creating automated workflows for literature monitoring or data extraction Construct sophisticated PubMed queries using Boolean operators, field tags, and specialized syntax. Basic Search Strategies: Combine concepts with Boolean operators (AND, OR, NOT) Use field tags to limit searches to specific record parts Employ phrase searching with double quotes for exact matches Apply wildcards for te

This is an excerpt. Refer to the complete source and its current requirements.

Source repository
davila7/claude-code-templates
Source file
cli-tool/components/skills/scientific/pubmed-database/SKILL.md
Fixed revision
21be197f100a12b8d0dd9a211cc244c8179f84d3
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Requirements

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Author: davila7/claude-code-templates · original repository metadata. Documentation review: Not reviewed. Last source check: 2026-11-09T15:01:40.258Z.

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License and attribution

MIT. Third-party content and copyright remain with their authors. Refer to the original license and terms.

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